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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913752.1_cds_XP_016463760.1_56854
CDS Infomation

[gene=LOC107786766] [db_xref=GeneID:107786766] [protein=probable manganese-transporting ATPase PDR2] [partial=3'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016463760.1] [location=join(59039..59287,60701..60790,61296..61498,62454..62526,62636..62808,62924..63095,63963..64067,64179..64289,64408..64494,64662..64844,70229..70279,70361..70486,71363..71442,72663..72771,76681..76809,78572..78637,78743..>78814)] [gbkey=CDS]
Sequence

ATGACGCGATTCCAAGTGGGCGGGAAAGTGGTGGAGAGTGTGGATTTGCTGAAGAAGAGA
CACTGGTCTTGGCGTTTCGATGTTTGGCCCTTCTTTATTCTCTACGGCGTTTGGCTCCTA
ACTATAGTACCTAGTTTAGACATTGCCGATGGCTTCATAGTTCTTGGTGCCCTTGTTGCC
TTTCATGTTCTCGTCTTCCTCTTCACTGTTTGGTCCGTTGATTTCAAGCGCTTTGTTCAC
TATTCCAAGGTGGATGACATACATCAAGCAGATTCTTGTAAAGTCACTCCAGCTAAGTTC
TCTGGAAGTAAAGAAGTCGTGCCTCTTCACTTTCGAAAGTTGGCTGGTTCCTCGTCCTCT
GAGGATCTGGAGGAGATTTATTTTGATTTTAGGAAGCAACGGTACATCTATTCAAAGGAG
AAAGGAACTTTCAGCAAACTTTCGTATCCTTCAAAAGAGACATTTGGATACTACCTTAAG
AATACTGGCCATGGAACTGAAGCTAAAATTGTTGCTGCAACTGAGAAGTGGGGCCGGAAC
GTGTTCGAATATCCTCAGCCAACATTTCAGAAATTAATGAAAGAGCAGGTCATGGAGCCT
TTCTTTGTATTCCAGGTCTTTTGTGTGGGTTTATGGTGCTTAGATGAATACTGGTATTAC
AGTTTGTTCACTCTCTTTATGCTGTTTATGTTTGAGTCAACAATGGCTAAGAGCCGGTTG
AAGACCCTGTCTGAATTAAGACGCGTAAGAGTTGACACCCAGACCTTGATGGTGTATCGC
TGTGGAAAGTGGGTGAAACTCTCTGGCACTGAATTGTTACCTGGAGATGTTGTGTCTATC
GGGCGTTCTGTTGGTCAAAATGGAGAAGACAAGTCCGTACCTGCTGACATGCTTTTGCTA
GCTGGAACTGCTATTGTGAATGAAGCTATTTTGACAGGCGAATCTACTCCACAGTGGAAG
GTTTCAATCATGGCTAGAGGAACAGGGGAGACATTGTCTGCTAGGCGAGATAAAGCCCAC
GTACTTTTCGGTGGAACCAAAATTTTGCAGCATACGGCCGATAAGACCTATCCAATGAAG
ACCCCTGATGGTGGATGCTTGGCTGTTGTTCTACGAACTGGGTTTGAAACAAGTCAAGGC
AAACTTATGCGGACTATTTTATTTTCAACGGAGAGGGTTACTGCTAACAGCTGGGAAAGT
GGGCTTTTTATTCTTTTCTTAGTCGTATTTGCATTAATAGCAGCCGGCTATGTTCTTAAA
AAGGGGCTCGAGGACCCAACAAGAAGTAAATACAAACTGTTTCTGAGTTGTTCATTGATA
ATTACTTCTGTTATCCCTCCCGAGCTGCCAATGGAGTTATCAATAGCTGTTAATACATCT
TTAATTGCTCTAGCACGACGAGGGATATTCTGTACAGAACCTTTTCGGATTCCATTTGCT
GGGAAGGTTGATATTTGTTGTTTCGATAAGACTGGAACCTTAACATCCGATGACATGGAG
TTCTCAGGGGTTGGTGGATTGACTGACAGTGAGGACTTAGAAAAAGAAATGACTAAAGTT
CCAACTCGTACGCAGGAAATTCTTGCTTCTTGCCATTCTTTGGTTTTTGTGGACAATAAG
CTGGTGGGTGATCCTCTTGAGAAGGCCGCCCTTAAAGGGATTGATTGGGGATATAAATCA
GATGAAAAAGCCATGCCAAAAAAGGGTGGAGGTGATGCTGTTCAGATTGTGCAGCGACAT
CATTTTGCATCTCACTTGAAAAGAATGGCTGTAGTTGTTCGTGTTCAGGAGCAATTTTTT
GCTTTTGTCAAGGGTGCACCAGAGACAATTCAGGAAAGACTCATTGATGTCCCACCATCC
TACGTGCCAACCTACAAGAAATACACCCGTCAAGGATCACGTGTATTGGCTCTGGCTTTC
AAGTCTCTGCCAGACATGACAGTTAGTGAAGCCAGAAGCCTGGAGAGAGATATGGTGGAA
AGTGGGCTTACTTTTGCTGGTTTTGCGGTGTTCAATTGCCCCATCAGAGGAGACTCGGCC
ACTGTCTTGACTGAATTAAAACAATCATCTCATGACTTG

Peptide Sequence

PEP ID

XP_016463760.1
PEP Infomation

PREDICTED: probable manganese-transporting ATPase PDR2, partial [Nicotiana tabacum]
Sequence

MTRFQVGGKVVESVDLLKKRHWSWRFDVWPFFILYGVWLLTIVPSLDIADGFIVLGALVA
FHVLVFLFTVWSVDFKRFVHYSKVDDIHQADSCKVTPAKFSGSKEVVPLHFRKLAGSSSS
EDLEEIYFDFRKQRYIYSKEKGTFSKLSYPSKETFGYYLKNTGHGTEAKIVAATEKWGRN
VFEYPQPTFQKLMKEQVMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRL
KTLSELRRVRVDTQTLMVYRCGKWVKLSGTELLPGDVVSIGRSVGQNGEDKSVPADMLLL
AGTAIVNEAILTGESTPQWKVSIMARGTGETLSARRDKAHVLFGGTKILQHTADKTYPMK
TPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFALIAAGYVLK
KGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFA
GKVDICCFDKTGTLTSDDMEFSGVGGLTDSEDLEKEMTKVPTRTQEILASCHSLVFVDNK
LVGDPLEKAALKGIDWGYKSDEKAMPKKGGGDAVQIVQRHHFASHLKRMAVVVRVQEQFF
AFVKGAPETIQERLIDVPPSYVPTYKKYTRQGSRVLALAFKSLPDMTVSEARSLERDMVE
SGLTFAGFAVFNCPIRGDSATVLTELKQSSHDLVMITGDQALTACHVAQQVHIISKPALI
LGRTKNKQGYDWVSPDETEIVSYSENEVEALSEAYDLCIGGECIEMLQQTSAVPKVVPYV
KVFARVAPEQKELILTTFKSVGRMTLMCGDGTNDVGALKQAHVGVALLNAMPPPKK

Transcript Sequence

Gene sequence data has not been registered.